Class simCDLP
- All Implemented Interfaces:
Runnable
,ChangeListener
,IBS.HasIBS
,IBS.HasIBS.DGroups
,IBS.HasIBS.DPairs
,MilestoneListener
,ODE.HasDE
,ODE.HasODE
,PDE.HasPDE
,SDE.HasSDE
,Features
,Features.Groups
,Features.Pairs
,HasHistogram
,HasHistogram.Degree
,HasHistogram.Fitness
,HasHistogram.StatisticsStationary
,HasMean
,HasMean.Fitness
,HasMean.Strategy
,HasPop2D
,HasPop2D.Fitness
,HasPop2D.Strategy
,HasPop3D
,HasPop3D.Fitness
,HasPop3D.Strategy
,HasS3
,CLOProvider
- Author:
- Christoph Hauert
- See Also:
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Nested Class Summary
Nested classes/interfaces inherited from class CDL
CDL.IBSPop
Nested classes/interfaces inherited from interface ChangeListener
ChangeListener.PendingAction
Nested classes/interfaces inherited from interface Features
Features.Groups, Features.Pairs, Features.Static
Nested classes/interfaces inherited from interface HasHistogram
HasHistogram.Degree, HasHistogram.Fitness, HasHistogram.StatisticsProbability, HasHistogram.StatisticsStationary, HasHistogram.StatisticsTime, HasHistogram.Strategy
Nested classes/interfaces inherited from interface HasMean
HasMean.Fitness, HasMean.Strategy
Nested classes/interfaces inherited from interface HasPop2D
HasPop2D.Fitness, HasPop2D.Strategy
Nested classes/interfaces inherited from interface HasPop3D
HasPop3D.Fitness, HasPop3D.Strategy
Nested classes/interfaces inherited from interface IBS.HasIBS
IBS.HasIBS.CGroups, IBS.HasIBS.CPairs, IBS.HasIBS.DGroups, IBS.HasIBS.DPairs, IBS.HasIBS.MCGroups, IBS.HasIBS.MCPairs
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Field Summary
FieldsModifier and TypeFieldDescriptionfinal CLOption
Command line option to determine the basin of attraction of punishers and cooperators.final CLOption
Command line option to generate a histogram of states visited.final CLOption
Command line option to set the threshold for corner states.final CLOption
Command line option to determine the time to reach the threshold of punishers.private boolean
Generate the basins of attraction.(package private) boolean
Generate a histogram of states visited.private boolean
The flag to indicate whether the initial configuration is given by the interior fixed pointQ
(for CDL only).(package private) double[]
Temporary variables for fixation probabilities and absorption times.(package private) PrintStream
The output stream.(package private) double
Time of previous sample.(package private) double[]
Temporary variables for fixation probabilities and absorption times.(package private) int
The threshold for qualifying as a corner state.(package private) long
The time to reach the punisher corner.(package private) double[]
Temporary variables for fixation probabilities and absorption times.Fields inherited from class CDLP
cloCostPunish, cloLeniencyCooperators, cloLeniencyLoners, cloPunishment, PUNISH
Fields inherited from class CDL
cloCost, cloInterest, cloLoneCooperator, cloLoneDefector, cloLoner, cloOthers, cloSolo, COOPERATE, costCoop, DEFECT, doSolo, isLinearPGG, LONER, othersOnly, payLoneCoop, payLoneDefect, payLoner, r1, rN
Fields inherited from class Discrete
cloMonoStop, monoStop, mutation
Fields inherited from class Module
cloDeathRate, cloGeometry, cloNGroup, cloNPopulation, cloPhase2DAxis, cloSpeciesUpdateRate, cloTraitColors, cloTraitDisable, cloTraitNames, competition, deathRate, defaultColor, engine, interaction, logger, map2fitness, markers, model, nActive, name, nGroup, nPopulation, nTraits, playerUpdate, speciesUpdateRate, structure, traitColor, trajectoryColor, VACANT
Fields inherited from interface HasS3
CORNER_LEFT, CORNER_RIGHT, CORNER_TOP, EDGE_BOTTOM, EDGE_LEFT, EDGE_RIGHT
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
collectCLO
(CLOParser parser) All providers of command line options must implement this method to collect their options.private double[]
findQ
(int n, double r, double sigma) Find the interior fixed pointQ
for the CDL model.private double
func
(double z, int n, double r) The function \(F(z)\) for the interior fixed point \(Q\).static void
Main method to run the simulation.void
Called whenever the state of the EvoLudo model changed.void
Called after a running EvoLudo model stopped because the model converged (or reached an absorbing state).protected void
Reset statistics.void
run()
private double
sign
(double x) The sign function.protected void
Start collecting statistics.protected void
updateStatistics
(double time) Update statistics.Methods inherited from class CDLP
avgScores, createIBSPop, getAuthors, getLeniencyCoop, getLeniencyLoner, getMinGameScore, getMonoGameScore, getPunishCost, getPunishFine, getTitle, groupScores, load, mixedScores, pairScores, setLeniencyCoop, setLeniencyLoner, setPunishCost, setPunishFine
Methods inherited from class CDL
adjustCLO, check, getCostCoop, getDependent, getInterest, getMaxGameScore, getOthersOnly, getPayLoneCoop, getPayLoneDefect, getPayLoner, getSolo, interest, setCostCoop, setInterest, setInterest, setOthersOnly, setPayLoneCoop, setPayLoneDefect, setPayLoner, setSolo, unload
Methods inherited from class Discrete
add, getMaxMonoGameScore, getMinMonoGameScore, getMonoStop, getMutation, setMonoStop
Methods inherited from class Module
createGeometry, getActiveTraits, getCompetitionGeometry, getDeathRate, getGeometry, getIBSPopulation, getID, getInteractionGeometry, getKey, getMapToFitness, getMarkers, getMeanColors, getModelTypes, getNActive, getName, getNGroup, getNPopulation, getNRoles, getNSpecies, getNTraits, getOpponent, getPlayerUpdate, getSpecies, getSpecies, getSpeciesUpdateRate, getTraitColor, getTraitColors, getTraitName, getTraitNames, getTrajectoryColor, getVacant, init, isNeutral, processColorMap, reset, setActiveTraits, setDeathRate, setGeometries, setIBSPopulation, setModel, setName, setNGroup, setNPopulation, setNTraits, setOpponent, setSpeciesUpdateRate, setTraitColors, setTraitNames, setTrajectoryColor
Methods inherited from class Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
Methods inherited from interface Features.Groups
getNGroup, isPairwise
Methods inherited from interface HasHistogram
getCustomLevels, getNTraits, getTraitColors
Methods inherited from interface IBS.HasIBS
createIBS
Methods inherited from interface IBS.HasIBS.DGroups
mixedScores
Methods inherited from interface MilestoneListener
modelDidInit, modelDidReset, modelLoaded, modelRelaxed, modelRunning, modelSettings, modelUnloaded, moduleLoaded, moduleRestored, moduleUnloaded
Methods inherited from interface ODE.HasODE
createODE
Methods inherited from interface PDE.HasPDE
createPDE
Methods inherited from interface SDE.HasSDE
createSDE
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Field Details
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threshold
int thresholdThe threshold for qualifying as a corner state. -
timesamples
long timesamplesThe time to reach the punisher corner. -
doLocation
boolean doLocationGenerate a histogram of states visited. -
doBasin
private boolean doBasinGenerate the basins of attraction. -
initInQ
private boolean initInQThe flag to indicate whether the initial configuration is given by the interior fixed pointQ
(for CDL only). -
out
PrintStream outThe output stream. Defaults toSystem.out
. -
mean
double[] meanTemporary variables for fixation probabilities and absorption times. -
var
double[] varTemporary variables for fixation probabilities and absorption times. -
state
double[] stateTemporary variables for fixation probabilities and absorption times. -
prevsample
double prevsampleTime of previous sample. -
cloThreshold
Command line option to set the threshold for corner states. -
cloBasin
Command line option to determine the basin of attraction of punishers and cooperators. -
cloTime2Punish
Command line option to determine the time to reach the threshold of punishers. -
cloHistogram
Command line option to generate a histogram of states visited.
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Constructor Details
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simCDLP
Create a new simulation to investigate the role of punishment in voluntary public goods games.- Parameters:
engine
- the pacemaker for running the model
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Method Details
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run
public void run()Description copied from class:Module
Default run-loop for modules. Opportunity to override in subclasses for running customized simulations. Currently only called from
EvoLudoJRE.simulation()
if custom simulation class is specified injar
file. -
modelChanged
Description copied from interface:ChangeListener
Called whenever the state of the EvoLudo model changed. Process potentially pending requests.Note: the model may process some pending actions directly and without notifying the listeners through
modelChanged(PendingAction)
first. In particular, this applies to pending actions that fire their own notifications, such asRESET
andINIT
that in turn triggermodelReset()
andmodelInit()
, respectively.- Specified by:
modelChanged
in interfaceChangeListener
- Parameters:
action
- pending action that needs to be processed.- See Also:
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modelStopped
public void modelStopped()Description copied from interface:MilestoneListener
Called after a running EvoLudo model stopped because the model converged (or reached an absorbing state).- Specified by:
modelStopped
in interfaceMilestoneListener
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startStatistics
protected void startStatistics()Start collecting statistics. -
resetStatistics
protected void resetStatistics()Reset statistics. -
updateStatistics
protected void updateStatistics(double time) Update statistics.- Parameters:
time
- the current time
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findQ
private double[] findQ(int n, double r, double sigma) Find the interior fixed pointQ
for the CDL model.- Parameters:
n
- the maximum size of the interaction groupr
- the multiplication factor of the public goodsigma
- the payoff for loners- Returns:
- the interior fixed point
Q
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func
private double func(double z, int n, double r) The function \(F(z)\) for the interior fixed point \(Q\).- Parameters:
z
- the fraction of lonersn
- the maximum size of the interaction groupr
- the multiplication factor of the public good- Returns:
- the value of \(F(z)\)
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sign
private double sign(double x) The sign function. Returns 1.0 for positive values, 0.0 for negative values, and 0.5 for zero.- Parameters:
x
- the value- Returns:
- the sign of the value
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collectCLO
Description copied from interface:CLOProvider
All providers of command line options must implement this method to collect their options.Each command line option is (uniquely) identified by it's name (see
CLOption.getName()
), which corresponds to the long version of the option. If an attempt is made to add an option with a name that already exists, theparser
issues a warning and ignores the option. Thus, in general, implementing subclasses should first register their options and callsuper.collectCLO(CLOParser)
at the end such that subclasses are able to override command line options specified in a parental class.Override this method in subclasses to add further command line options. Subclasses must make sure that they include a call to super.
- Specified by:
collectCLO
in interfaceCLOProvider
- Overrides:
collectCLO
in classCDLP
- Parameters:
parser
- the reference to parser that manages command line options- See Also:
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main
Main method to run the simulation.- Parameters:
args
- the array of command line arguments
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