Uses of Package
org.evoludo.simulator.models

Packages that use org.evoludo.simulator.models

Package	Description
org.evoludo
org.evoludo.graphics
org.evoludo.simulator
org.evoludo.simulator.exec
org.evoludo.simulator.models
org.evoludo.simulator.modules
org.evoludo.simulator.views

Classes in org.evoludo.simulator.models used by org.evoludo

Class	Description
ChangeListener	All ChangeListener's get informed about state changes of the core of EvoLudo models.
ChangeListener.PendingAction	The GUI or engine can request running models to suspend execution and process a pendingAction.
MilestoneListener	All MilestoneListener's get informed about milestones and state changes of the core of EvoLudo modules.
Model	Interface for EvoLudo models to interact with Modules, which define interactions (or games), and the engine EvoLudo, which manages the (un)loading and execution of different models based on what model types the module supports.

Classes in org.evoludo.simulator.models used by org.evoludo.graphics

Class	Description
Data	Data types that are handled by the model.
Model	Interface for EvoLudo models to interact with Modules, which define interactions (or games), and the engine EvoLudo, which manages the (un)loading and execution of different models based on what model types the module supports.

Classes in org.evoludo.simulator.models used by org.evoludo.simulator

Class	Description
ChangeListener	All ChangeListener's get informed about state changes of the core of EvoLudo models.
ChangeListener.PendingAction	The GUI or engine can request running models to suspend execution and process a pendingAction.
IBSPopulation	The core class for individual based simulations.
MilestoneListener	All MilestoneListener's get informed about milestones and state changes of the core of EvoLudo modules.
Model	Interface for EvoLudo models to interact with Modules, which define interactions (or games), and the engine EvoLudo, which manages the (un)loading and execution of different models based on what model types the module supports.
PDE	Numerical integration of partial differential equations for reaction-diffusion systems based on Euler's method (fixed step size)
PDESupervisor	Supervisor of reaction-diffusion processes.
Type	Model types that modules may support.

Classes in org.evoludo.simulator.models used by org.evoludo.simulator.exec

Class	Description
ChangeListener	All ChangeListener's get informed about state changes of the core of EvoLudo models.
ChangeListener.PendingAction	The GUI or engine can request running models to suspend execution and process a pendingAction.
IBS	Base class for individual based simulation models, IBS.
IBS.HasIBS	Modules that offer individual based simulation models must implement this interface.
IBS.HasIBS.CPairs	Modules that offer individual based simulation models with continuous traits and pairwise interactions must implement this interface.
IBS.HasIBS.DGroups	Modules that offer individual based simulation models with discrete traits and interactions in groups must implement this interface.
IBS.HasIBS.DPairs	Modules that offer individual based simulation models with discrete traits and pairwise interactions must implement this interface.
IBSCPopulation	The core class for individual based simulations with a single continuous trait/strategy.
IBSD	Base class for individual based simulation models, IBS, with discrete traits/strategies.
IBSDPopulation	The core class for individual based simulations with discrete traits/strategies.
IBSPopulation	The core class for individual based simulations.
MilestoneListener	All MilestoneListener's get informed about milestones and state changes of the core of EvoLudo modules.
ODE.HasDE	Methods that every Module must implement, which advertises numerical solutions based on differential equations.
ODE.HasODE	Additional methods that must be implemented by Modules that advertise numerical solutions based on ordinary differential equations.
PDE.HasPDE	Methods that every Module must implement, which advertises numerical solutions based on partial differential equations.
SDE.HasSDE	Interface for modules that implement stochastic differential equations (SDE).
Type	Model types that modules may support.

Classes in org.evoludo.simulator.models used by org.evoludo.simulator.models

Class	Description
ChangeListener.PendingAction	The GUI or engine can request running models to suspend execution and process a pendingAction.
Continuous	Common interface for all models with continuous strategy sets.
Data	Data types that are handled by the model.
Discrete	Common interface for all models with discrete strategy sets.
FixationData	EXPERIMENTAL: should mature into data structure useful for statistics
IBS	Base class for individual based simulation models, IBS.
IBS.Event	Enumeration of possible events in focal population.
IBS.HasIBS	Modules that offer individual based simulation models must implement this interface.
IBS.HasIBS.CGroups	Modules that offer individual based simulation models with continuous traits and interactions in groups must implement this interface.
IBS.HasIBS.CPairs	Modules that offer individual based simulation models with continuous traits and pairwise interactions must implement this interface.
IBS.HasIBS.DGroups	Modules that offer individual based simulation models with discrete traits and interactions in groups must implement this interface.
IBS.HasIBS.DPairs	Modules that offer individual based simulation models with discrete traits and pairwise interactions must implement this interface.
IBS.HasIBS.MCGroups	Modules that offer individual based simulation models with continuous traits and interactions in groups must implement this interface.
IBS.HasIBS.MCPairs	Modules that offer individual based simulation models with multiple continuous traits and pairwise interactions must implement this interface.
IBS.MigrationType	Types of species updates (only relevant for multi-species models): none no migration D diffusive migration (exchange of neighbors) B birth-death migration (fit migrates, random death). d death-birth migration (random death, fit migrates).
IBS.ScoringType	Schedules for resetting individual payoffs/fitness: onchange Reset when changing trait (only after updating from reference model with a different trait) onupdate Reset when updating from reference individual (not necessarily a change in trait) ephemeral Determine payoffs/fitness calculated only for updating
IBS.Statistics	The class managing the settings for statistics mode.
IBS.Statistics.Type	Type of statistics.
IBSC.Init	The initialization of populations with continuous traits.
IBSC.Init.Type	Type of initial density distribution of traits.
IBSCPopulation	The core class for individual based simulations with a single continuous trait/strategy.
IBSD.Init	The initialization of populations with discrete traits.
IBSD.Init.Type	Type of initial density distribution.
IBSD.OptimizationType	Type of optimizations.
IBSDPopulation	The core class for individual based simulations with discrete traits/strategies.
IBSDPopulation.link	A minimalstic helper class (or data structure) to represent a single directed link in the network structure.
IBSGroup	Interaction and reference groups in IBS models.
IBSGroup.SamplingType	Types of sampling of groups for interactions or references: none no interactions all interact with all neighbours random interact with n random neighbours
IBSMCPopulation	The core class for individual based simulations with multiple continuous traits/strategies.
IBSPopulation	The core class for individual based simulations.
Mode	Modes of the model.
Model	Interface for EvoLudo models to interact with Modules, which define interactions (or games), and the engine EvoLudo, which manages the (un)loading and execution of different models based on what model types the module supports.
ODE	Common base class for all differential equations models.
ODE.HasDE	Methods that every Module must implement, which advertises numerical solutions based on differential equations.
ODE.InitType	Types of initial configurations.
PDE	Numerical integration of partial differential equations for reaction-diffusion systems based on Euler's method (fixed step size)
PDE.InitType	Types of initial configurations.
PDESupervisor	Supervisor of reaction-diffusion processes.
PopulationUpdate	The implementation of population updates.
PopulationUpdate.Type	Types of species updates (only relevant for multi-species models): synchronous Synchronized population updates.
Type	Model types that modules may support.

Classes in org.evoludo.simulator.models used by org.evoludo.simulator.modules

Class	Description
ChangeListener	All ChangeListener's get informed about state changes of the core of EvoLudo models.
ChangeListener.PendingAction	The GUI or engine can request running models to suspend execution and process a pendingAction.
Data	Data types that are handled by the model.
Discrete	Common interface for all models with discrete strategy sets.
IBS.HasIBS	Modules that offer individual based simulation models must implement this interface.
IBS.HasIBS.CPairs	Modules that offer individual based simulation models with continuous traits and pairwise interactions must implement this interface.
IBS.HasIBS.DGroups	Modules that offer individual based simulation models with discrete traits and interactions in groups must implement this interface.
IBS.HasIBS.DPairs	Modules that offer individual based simulation models with discrete traits and pairwise interactions must implement this interface.
IBS.HasIBS.MCPairs	Modules that offer individual based simulation models with multiple continuous traits and pairwise interactions must implement this interface.
IBSDPopulation	The core class for individual based simulations with discrete traits/strategies.
IBSGroup	Interaction and reference groups in IBS models.
IBSPopulation	The core class for individual based simulations.
Markers	The class to manage customised markers for graphs.
MilestoneListener	All MilestoneListener's get informed about milestones and state changes of the core of EvoLudo modules.
Model	Interface for EvoLudo models to interact with Modules, which define interactions (or games), and the engine EvoLudo, which manages the (un)loading and execution of different models based on what model types the module supports.
ODE	Common base class for all differential equations models.
ODE.HasDE	Methods that every Module must implement, which advertises numerical solutions based on differential equations.
ODE.HasODE	Additional methods that must be implemented by Modules that advertise numerical solutions based on ordinary differential equations.
PDE.HasPDE	Methods that every Module must implement, which advertises numerical solutions based on partial differential equations.
RungeKutta	Implementation of Runge-Kutta method with adaptive step size for the numerical integration of systems of differential equations.
SDE.HasSDE	Interface for modules that implement stochastic differential equations (SDE).
Type	Model types that modules may support.

Classes in org.evoludo.simulator.models used by org.evoludo.simulator.views

Class	Description
ChangeListener	All ChangeListener's get informed about state changes of the core of EvoLudo models.
ChangeListener.PendingAction	The GUI or engine can request running models to suspend execution and process a pendingAction.
Data	Data types that are handled by the model.
MilestoneListener	All MilestoneListener's get informed about milestones and state changes of the core of EvoLudo modules.
Mode	Modes of the model.
Model	Interface for EvoLudo models to interact with Modules, which define interactions (or games), and the engine EvoLudo, which manages the (un)loading and execution of different models based on what model types the module supports.